CDS

Accession Number TCMCG016C02332
gbkey CDS
Protein Id OMP03143.1
Location join(4080..4169,5397..6308)
Organism Corchorus capsularis
locus_tag CCACVL1_02548

Protein

Length 333aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01006125.1
Definition hypothetical protein CCACVL1_02548 [Corchorus capsularis]
Locus_tag CCACVL1_02548

EGGNOG-MAPPER Annotation

COG_category V
Description pre-mRNA-splicing factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12850        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010226        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTTTATTTTTCCAGGAATTCTCCCCTGGATCCAATGGACGAATGACTACAATGGGTGTATATGTGCGTGATTTGCTTCTTGGACAGTATTACTTCGACACCCTTTTCCCCCGAATACCTGTTCCTGTGATGCGTCAGATTGTATCCAATCTTGAGAAGATGAAGCTGCCTACAAAACCTTCTGGTACAACTGGGGATTCGAACCGTCATGGATCCGATGACACTGCTCGCCGCCCACCATCAGTGAAAGCTGCACTTTCTGTCTCCTTTGGTCAGCGTGCTCCCCATCGTGCATCAACTAGGGACTCTTCTCCTGTGCGTCGCACCCATCCACCACCACCGTATGACAGATCTAGCACTGATGATTCCAGAAGATCTCCCAGCCGCCATCGCAGCCAGAGCCGAGAATATTCTGATAGAGAATATTCTGACAAGGACAGAGACCGTGACCGCAATAGGGATAGGGATAGGGATAGGGATAGCGATAGGGACAGGGGCAGGGATTGGGATCGTGATAAGGAAAGGCAGAGGGAGAGGGAGAGGGATAGGGGCAGGGACCGGGACCGTGATGGGGATCGGGATCGGGATCGTGATTATGATAGAGAAAGAATAAAGGACAAGGAGAGGGATAGGGATAGAAGGCACGACTATGATCGAAGGTCAAGGTACTCAGAGAAAAGGGACTATAAAGAATCGTATGATGATGATAGGCATTACGGAGTAGCTAGCTCTCATAGGAGCAGAAGCCGAAGTCGCAGTAGGAGTAGAAGTAGGAGCAGAAGTCGGAGTTTAATAGCAGGTAATGGTCATTTTGATCGTCATTCAAGTCCGCAGAAAGAGGGAGGCAAGGAGAAGTCATCTGCATCAAGCAACTTGGCAAAGCTTAAGGATATGTACGGTGATTTAAGTGATAAAAAGGAGGATGGCTTTGAAAGGGCACCCAGGAAGGACAACAGTGGTGAAGAGGTGATTAGGCTTGGTGGTTCTTCTTGGAAATAG
Protein:  
MILFFQEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRQIVSNLEKMKLPTKPSGTTGDSNRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTHPPPPYDRSSTDDSRRSPSRHRSQSREYSDREYSDKDRDRDRNRDRDRDRDSDRDRGRDWDRDKERQRERERDRGRDRDRDGDRDRDRDYDRERIKDKERDRDRRHDYDRRSRYSEKRDYKESYDDDRHYGVASSHRSRSRSRSRSRSRSRSRSLIAGNGHFDRHSSPQKEGGKEKSSASSNLAKLKDMYGDLSDKKEDGFERAPRKDNSGEEVIRLGGSSWK